Quantitative Genetics
Software Sites

Science Biology Genetics Software
Science Biology Genetics Software sites
Science Biology Genetics Software
Science Biology Genetics Software sites
Alice Software
Database system to build and publish synonymised checklists of species. Species descriptions include pre-established fields and detailed descriptions employing any number of user-defined fields.
BioConstructor Molecular Cloning Software
BioConstructor is a bioinformatics solution focussing on molecular cloning. Runs on Windows , Mac OS X , Linux.
Broad Institute Genetics Software
Offers a wide range of software for genome sequence analysis , genetic variation , linkage analysis , expression analysis , and PCR primer selection.
Open source image analysis software designed for biologists without training in computer vision or programming to quantitatively measure phenotypes from thousands of images automatically.
CounterTrace II DNA Sequencing
Software and reagent for improving the quality and read length of DNA sequence traces collected on the ABI 3730 DNA sequencer.
CREME: Cis-REgulatory Module Explorer
Identifies modules of putative transcription factor binding sites that are specific to promoters of co-expressed human genes. Provides a resource for decoding microarray experiments.
Gene Array Analyzer Software
Software for the efficient management , analysis and visualization of large amounts of gene expression data.
Gene Expression Open Source System
Open source database and analysis package used to store and analyze gene expression data. Includes microarray center workflow management , and researcher tools to analyze final data.
Web-based microarray analysis system that combines data management and analytical functions with integrated , current gene annotation from public databases. Product overview in pdf format.
Genetic Linkage Analysis
Offers links and other resources for genetic analysis software from the Rockefeller University.
Genetic Network Maps as Java Applets
Genetic networks controlling development in Sea Urchin represented as Java applets. Formal scheme. Molecular interactions modelled as Petri Net.
GPL software for viewing and editing DNA and amino acid sequences. Integrated alignment , PCR , BLAST searches , and shared databases. Windows version is available for download (English and German).
Hands on Genetics
Instructional software for basic genetics , such as DNA , PCR , Mendel , Hardy-Weinberg , meiosis and computer simulations. Freeware for Mac and Windows.
HyPhy: Hypothesis Testing Using Phylogenies
Free multiplatform software package intended to perform maximum likelihood analyses of genetic sequence data.
Program that draws chromosome maps (as EMF files) using the output of MapMaker EXP. Delphi source code is freely available upon request. The software is available under the MIT licence.



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